Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Scn1bP97952 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Scn1bP97952 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Scn1bP97952 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1bP97952 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.01□□□□□ -0.33
Scn1bP97952 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm12644-201ENSMUST00000119935 606 ntBASIC13.01□□□□□ -0.33
Scn1bP97952 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm8655-201ENSMUST00000221159 852 ntBASIC13.01□□□□□ -0.33
Scn1bP97952 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Scn1bP97952 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn1bP97952 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1bP97952 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13□□□□□ -0.33
Scn1bP97952 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Gm12497-201ENSMUST00000138778 237 ntBASIC13□□□□□ -0.33
Scn1bP97952 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13□□□□□ -0.33
Scn1bP97952 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13□□□□□ -0.33
Scn1bP97952 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn1bP97952 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scn1bP97952 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1bP97952 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Scn1bP97952 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.99□□□□□ -0.33
Scn1bP97952 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms