Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.84□□□□□ -0.51
Lsm5P62322 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Gm8584-201ENSMUST00000171982 758 ntBASIC11.84□□□□□ -0.51
Lsm5P62322 Gm27646-201ENSMUST00000183989 110 ntBASIC11.84□□□□□ -0.51
Lsm5P62322 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.84□□□□□ -0.51
Lsm5P62322 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm5P62322 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm5P62322 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm5P62322 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm5P62322 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm5P62322 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Lsm5P62322 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm5P62322 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Lsm5P62322 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.83□□□□□ -0.52
Lsm5P62322 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.83□□□□□ -0.52
Lsm5P62322 Gm25016-201ENSMUST00000158399 131 ntBASIC11.83□□□□□ -0.52
Lsm5P62322 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Lsm5P62322 Gm6296-201ENSMUST00000222599 943 ntBASIC11.83□□□□□ -0.52
Lsm5P62322 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.83□□□□□ -0.52
Lsm5P62322 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Lsm5P62322 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.83□□□□□ -0.52
Lsm5P62322 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm5P62322 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Lsm5P62322 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm5P62322 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm5P62322 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Lsm5P62322 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm5P62322 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.82□□□□□ -0.52
Lsm5P62322 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Lsm5P62322 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Lsm5P62322 Gm14042-201ENSMUST00000120139 833 ntBASIC11.82□□□□□ -0.52
Lsm5P62322 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms