Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.95□□□□□ -0.34
Lsm3P62311 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Gm9726-201ENSMUST00000180321 678 ntBASIC12.95□□□□□ -0.34
Lsm3P62311 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.95□□□□□ -0.34
Lsm3P62311 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm3P62311 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lsm3P62311 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.95□□□□□ -0.34
Lsm3P62311 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm3P62311 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lsm3P62311 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm3P62311 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lsm3P62311 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm3P62311 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.94□□□□□ -0.34
Lsm3P62311 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.94□□□□□ -0.34
Lsm3P62311 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Gm7506-201ENSMUST00000207758 815 ntBASIC12.94□□□□□ -0.34
Lsm3P62311 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm3P62311 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm3P62311 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm3P62311 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm3P62311 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Lsm3P62311 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lsm3P62311 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.93□□□□□ -0.34
Lsm3P62311 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.93□□□□□ -0.34
Lsm3P62311 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm3P62311 Gm8584-201ENSMUST00000171982 758 ntBASIC12.93□□□□□ -0.34
Lsm3P62311 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms