Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.64□□□□□ -0.39
Sf3b6P59708 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.63□□□□□ -0.39
Sf3b6P59708 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sf3b6P59708 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Sf3b6P59708 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.63□□□□□ -0.39
Sf3b6P59708 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sf3b6P59708 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sf3b6P59708 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Mir5126-201ENSMUST00000175513 77 ntBASIC12.63□□□□□ -0.39
Sf3b6P59708 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Sf3b6P59708 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.63□□□□□ -0.39
Sf3b6P59708 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sf3b6P59708 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.63□□□□□ -0.39
Sf3b6P59708 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.62□□□□□ -0.39
Sf3b6P59708 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Gm45167-201ENSMUST00000208007 322 ntBASIC12.62□□□□□ -0.39
Sf3b6P59708 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.62□□□□□ -0.39
Sf3b6P59708 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sf3b6P59708 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3b6P59708 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b6P59708 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sf3b6P59708 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.61□□□□□ -0.39
Sf3b6P59708 Gm12350-201ENSMUST00000121208 462 ntBASIC12.61□□□□□ -0.39
Sf3b6P59708 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.61□□□□□ -0.39
Sf3b6P59708 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3b6P59708 Gm9182-201ENSMUST00000217829 639 ntBASIC12.61□□□□□ -0.39
Sf3b6P59708 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b6P59708 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3b6P59708 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b6P59708 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms