Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NrlP54846 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
NrlP54846 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NrlP54846 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.14■□□□□ 0.01
NrlP54846 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.14■□□□□ 0.01
NrlP54846 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NrlP54846 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.14■□□□□ 0.01
NrlP54846 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NrlP54846 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NrlP54846 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.14■□□□□ 0.01
NrlP54846 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.14■□□□□ 0.01
NrlP54846 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.14■□□□□ 0.01
NrlP54846 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.14■□□□□ 0.01
NrlP54846 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NrlP54846 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NrlP54846 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.14■□□□□ 0.01
NrlP54846 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NrlP54846 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NrlP54846 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NrlP54846 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NrlP54846 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.13■□□□□ 0.01
NrlP54846 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.13■□□□□ 0.01
NrlP54846 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.13■□□□□ 0.01
NrlP54846 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.13■□□□□ 0.01
NrlP54846 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
NrlP54846 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NrlP54846 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NrlP54846 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NrlP54846 Gm15460-201ENSMUST00000118147 391 ntBASIC15.12■□□□□ 0.01
NrlP54846 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.12■□□□□ 0.01
NrlP54846 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NrlP54846 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.12■□□□□ 0.01
NrlP54846 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NrlP54846 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NrlP54846 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.11■□□□□ 0.01
NrlP54846 Gm10275-202ENSMUST00000168697 495 ntBASIC15.11■□□□□ 0.01
NrlP54846 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.11■□□□□ 0.01
NrlP54846 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NrlP54846 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms