Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp3P28862 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Mmp3P28862 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.17■□□□□ 0.02
Mmp3P28862 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.17■□□□□ 0.02
Mmp3P28862 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.17■□□□□ 0.02
Mmp3P28862 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp3P28862 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp3P28862 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Mmp3P28862 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.16■□□□□ 0.02
Mmp3P28862 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Mmp3P28862 Gm15678-201ENSMUST00000117573 960 ntBASIC15.16■□□□□ 0.02
Mmp3P28862 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.16■□□□□ 0.02
Mmp3P28862 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.16■□□□□ 0.02
Mmp3P28862 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.16■□□□□ 0.02
Mmp3P28862 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Mmp3P28862 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.16■□□□□ 0.02
Mmp3P28862 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Mmp3P28862 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.16■□□□□ 0.02
Mmp3P28862 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp3P28862 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm18187-201ENSMUST00000196476 984 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm18905-201ENSMUST00000205454 928 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp3P28862 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.15■□□□□ 0.02
Mmp3P28862 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp3P28862 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.14■□□□□ 0.01
Mmp3P28862 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.14■□□□□ 0.01
Mmp3P28862 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Mmp3P28862 Gm13385-201ENSMUST00000121089 220 ntBASIC15.14■□□□□ 0.01
Mmp3P28862 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Mmp3P28862 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Mmp3P28862 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.14■□□□□ 0.01
Mmp3P28862 Mir7654-201ENSMUST00000185082 70 ntBASIC15.14■□□□□ 0.01
Mmp3P28862 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.14■□□□□ 0.01
Mmp3P28862 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms