Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NdnP25233 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NdnP25233 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
NdnP25233 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NdnP25233 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NdnP25233 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.43□□□□□ -0.58
NdnP25233 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Gm25016-201ENSMUST00000158399 131 ntBASIC11.43□□□□□ -0.58
NdnP25233 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.43□□□□□ -0.58
NdnP25233 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NdnP25233 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.43□□□□□ -0.58
NdnP25233 Mir6404-201ENSMUST00000183699 94 ntBASIC11.43□□□□□ -0.58
NdnP25233 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NdnP25233 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.43□□□□□ -0.58
NdnP25233 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NdnP25233 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.43□□□□□ -0.58
NdnP25233 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NdnP25233 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.42□□□□□ -0.58
NdnP25233 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
NdnP25233 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.42□□□□□ -0.58
NdnP25233 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.42□□□□□ -0.58
NdnP25233 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
NdnP25233 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.42□□□□□ -0.58
NdnP25233 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NdnP25233 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.42□□□□□ -0.58
NdnP25233 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.41□□□□□ -0.58
NdnP25233 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.41□□□□□ -0.58
NdnP25233 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.41□□□□□ -0.58
NdnP25233 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.41□□□□□ -0.58
NdnP25233 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Gm10252-201ENSMUST00000209541 832 ntBASIC11.41□□□□□ -0.58
NdnP25233 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NdnP25233 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NdnP25233 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NdnP25233 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms