Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.29□□□□□ -0.28
Clk1P22518 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clk1P22518 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clk1P22518 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clk1P22518 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.29□□□□□ -0.28
Clk1P22518 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clk1P22518 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Clk1P22518 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clk1P22518 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clk1P22518 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.28□□□□□ -0.28
Clk1P22518 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clk1P22518 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clk1P22518 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.28□□□□□ -0.28
Clk1P22518 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.28□□□□□ -0.28
Clk1P22518 Gm2756-201ENSMUST00000195851 400 ntBASIC13.28□□□□□ -0.28
Clk1P22518 Gm2451-201ENSMUST00000199447 999 ntBASIC13.28□□□□□ -0.28
Clk1P22518 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Gm10290-201ENSMUST00000200451 999 ntBASIC13.28□□□□□ -0.28
Clk1P22518 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.28□□□□□ -0.28
Clk1P22518 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clk1P22518 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.28□□□□□ -0.28
Clk1P22518 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Clk1P22518 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.28□□□□□ -0.28
Clk1P22518 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clk1P22518 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.27□□□□□ -0.28
Clk1P22518 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Clk1P22518 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.27□□□□□ -0.28
Clk1P22518 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Clk1P22518 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clk1P22518 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.27□□□□□ -0.29
Clk1P22518 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.27□□□□□ -0.29
Clk1P22518 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.27□□□□□ -0.29
Clk1P22518 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.27□□□□□ -0.29
Clk1P22518 Gm27494-201ENSMUST00000184735 189 ntBASIC13.27□□□□□ -0.29
Clk1P22518 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.27□□□□□ -0.29
Clk1P22518 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.27□□□□□ -0.29
Clk1P22518 Gm18057-201ENSMUST00000208220 503 ntBASIC13.27□□□□□ -0.29
Clk1P22518 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.27□□□□□ -0.29
Clk1P22518 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Clk1P22518 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clk1P22518 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Clk1P22518 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms