Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm2756-201ENSMUST00000195851 400 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdx1P18111 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdx1P18111 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Cdx1P18111 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdx1P18111 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.51□□□□□ -0.57
Cdx1P18111 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdx1P18111 Gm14140-201ENSMUST00000119999 995 ntBASIC11.51□□□□□ -0.57
Cdx1P18111 Gm6736-201ENSMUST00000166583 948 ntBASIC11.51□□□□□ -0.57
Cdx1P18111 Gm25927-201ENSMUST00000175058 117 ntBASIC11.51□□□□□ -0.57
Cdx1P18111 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdx1P18111 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdx1P18111 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdx1P18111 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.51□□□□□ -0.57
Cdx1P18111 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cdx1P18111 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdx1P18111 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cdx1P18111 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.5□□□□□ -0.57
Cdx1P18111 Paupar-201ENSMUST00000194826 3482 ntBASIC11.5□□□□□ -0.57
Cdx1P18111 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.5□□□□□ -0.57
Cdx1P18111 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdx1P18111 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.5□□□□□ -0.57
Cdx1P18111 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdx1P18111 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Cdx1P18111 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.5□□□□□ -0.57
Cdx1P18111 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms