Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.39□□□□□ -0.43
UbbP0CG49 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.39□□□□□ -0.43
UbbP0CG49 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.39□□□□□ -0.43
UbbP0CG49 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UbbP0CG49 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.39□□□□□ -0.43
UbbP0CG49 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.39□□□□□ -0.43
UbbP0CG49 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.39□□□□□ -0.43
UbbP0CG49 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UbbP0CG49 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UbbP0CG49 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UbbP0CG49 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Gm7153-201ENSMUST00000117092 455 ntBASIC12.38□□□□□ -0.43
UbbP0CG49 Gm16026-204ENSMUST00000162652 683 ntBASIC12.38□□□□□ -0.43
UbbP0CG49 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UbbP0CG49 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
UbbP0CG49 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.38□□□□□ -0.43
UbbP0CG49 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
UbbP0CG49 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UbbP0CG49 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UbbP0CG49 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UbbP0CG49 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.37□□□□□ -0.43
UbbP0CG49 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.37□□□□□ -0.43
UbbP0CG49 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UbbP0CG49 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Gm10060-201ENSMUST00000212002 111 ntBASIC12.37□□□□□ -0.43
UbbP0CG49 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.37□□□□□ -0.43
UbbP0CG49 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.37□□□□□ -0.43
UbbP0CG49 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UbbP0CG49 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UbbP0CG49 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.36□□□□□ -0.43
UbbP0CG49 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Acot6-202ENSMUST00000222921 3622 ntBASIC12.36□□□□□ -0.43
UbbP0CG49 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UbbP0CG49 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UbbP0CG49 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.36□□□□□ -0.43
UbbP0CG49 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms