Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
TcraP01849 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
TcraP01849 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
TcraP01849 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
TcraP01849 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.39□□□□□ -0.75
TcraP01849 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Gm12497-201ENSMUST00000138778 237 ntBASIC10.39□□□□□ -0.75
TcraP01849 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Gm43767-201ENSMUST00000198933 381 ntBASIC10.39□□□□□ -0.75
TcraP01849 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
TcraP01849 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TcraP01849 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.39□□□□□ -0.75
TcraP01849 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.38□□□□□ -0.75
TcraP01849 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
TcraP01849 Gm8344-201ENSMUST00000119813 856 ntBASIC10.38□□□□□ -0.75
TcraP01849 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Gm27867-201ENSMUST00000184778 125 ntBASIC10.38□□□□□ -0.75
TcraP01849 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.38□□□□□ -0.75
TcraP01849 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.38□□□□□ -0.75
TcraP01849 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.38□□□□□ -0.75
TcraP01849 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.38□□□□□ -0.75
TcraP01849 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
TcraP01849 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.38□□□□□ -0.75
TcraP01849 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TcraP01849 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.38□□□□□ -0.75
TcraP01849 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TcraP01849 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
TcraP01849 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
TcraP01849 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
TcraP01849 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
TcraP01849 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.37□□□□□ -0.75
TcraP01849 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms