Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Alx3O70137 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13□□□□□ -0.33
Alx3O70137 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Alx3O70137 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13□□□□□ -0.33
Alx3O70137 Gm18733-201ENSMUST00000173950 856 ntBASIC13□□□□□ -0.33
Alx3O70137 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Alx3O70137 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13□□□□□ -0.33
Alx3O70137 AC154222.1-201ENSMUST00000223882 475 ntBASIC13□□□□□ -0.33
Alx3O70137 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Alx3O70137 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Alx3O70137 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.99□□□□□ -0.33
Alx3O70137 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Alx3O70137 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.99□□□□□ -0.33
Alx3O70137 Gm14140-201ENSMUST00000119999 995 ntBASIC12.99□□□□□ -0.33
Alx3O70137 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Alx3O70137 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Alx3O70137 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Alx3O70137 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.99□□□□□ -0.33
Alx3O70137 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.99□□□□□ -0.33
Alx3O70137 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.99□□□□□ -0.33
Alx3O70137 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Alx3O70137 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Alx3O70137 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx3O70137 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.98□□□□□ -0.33
Alx3O70137 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Gm27301-201ENSMUST00000184012 127 ntBASIC12.98□□□□□ -0.33
Alx3O70137 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Alx3O70137 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.98□□□□□ -0.33
Alx3O70137 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx3O70137 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Alx3O70137 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms