Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.38■□□□□ 0.05
Per1O35973 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Per1O35973 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.38■□□□□ 0.05
Per1O35973 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Per1O35973 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Per1O35973 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.38■□□□□ 0.05
Per1O35973 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.38■□□□□ 0.05
Per1O35973 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Per1O35973 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Per1O35973 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.37■□□□□ 0.05
Per1O35973 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Gm12859-201ENSMUST00000117834 427 ntBASIC15.37■□□□□ 0.05
Per1O35973 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.37■□□□□ 0.05
Per1O35973 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.37■□□□□ 0.05
Per1O35973 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Gm8927-201ENSMUST00000181978 981 ntBASIC15.37■□□□□ 0.05
Per1O35973 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.37■□□□□ 0.05
Per1O35973 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Per1O35973 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.37■□□□□ 0.05
Per1O35973 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.37■□□□□ 0.05
Per1O35973 Gm3222-201ENSMUST00000071282 990 ntBASIC15.37■□□□□ 0.05
Per1O35973 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Mir497b-201ENSMUST00000093601 125 ntBASIC15.37■□□□□ 0.05
Per1O35973 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.37■□□□□ 0.05
Per1O35973 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Per1O35973 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Per1O35973 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Per1O35973 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Per1O35973 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Per1O35973 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Gm24420-201ENSMUST00000176676 59 ntBASIC15.36■□□□□ 0.05
Per1O35973 Gm29741-201ENSMUST00000192667 421 ntBASIC15.36■□□□□ 0.05
Per1O35973 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.36■□□□□ 0.05
Per1O35973 Gm18905-201ENSMUST00000205454 928 ntBASIC15.36■□□□□ 0.05
Per1O35973 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.36■□□□□ 0.05
Per1O35973 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.36■□□□□ 0.05
Per1O35973 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Per1O35973 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.36■□□□□ 0.05
Per1O35973 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Per1O35973 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Per1O35973 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Per1O35973 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Per1O35973 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Per1O35973 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Per1O35973 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Per1O35973 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Per1O35973 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Per1O35973 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Per1O35973 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Per1O35973 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms