Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nr1i3O35627 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.28■□□□□ 0.04
Nr1i3O35627 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Gm10175-201ENSMUST00000086013 645 ntBASIC15.28■□□□□ 0.04
Nr1i3O35627 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nr1i3O35627 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.28■□□□□ 0.04
Nr1i3O35627 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr1i3O35627 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.27■□□□□ 0.04
Nr1i3O35627 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.27■□□□□ 0.04
Nr1i3O35627 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr1i3O35627 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.27■□□□□ 0.04
Nr1i3O35627 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr1i3O35627 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Nr1i3O35627 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Nr1i3O35627 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr1i3O35627 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Gm11779-201ENSMUST00000118541 368 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Gm15467-201ENSMUST00000120582 445 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.26■□□□□ 0.03
Nr1i3O35627 AA619741-201ENSMUST00000195095 646 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Gm18206-201ENSMUST00000207027 926 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.26■□□□□ 0.03
Nr1i3O35627 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 BC001981-202ENSMUST00000191393 1545 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr1i3O35627 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.26■□□□□ 0.03
Nr1i3O35627 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.25■□□□□ 0.03
Nr1i3O35627 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Gm14494-201ENSMUST00000118786 435 ntBASIC15.25■□□□□ 0.03
Nr1i3O35627 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Rprl2-201ENSMUST00000157150 290 ntBASIC15.25■□□□□ 0.03
Nr1i3O35627 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.25■□□□□ 0.03
Nr1i3O35627 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.25■□□□□ 0.03
Nr1i3O35627 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nr1i3O35627 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nr1i3O35627 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms