Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Slc1a6O35544 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.02□□□□□ -0.16
Slc1a6O35544 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.02□□□□□ -0.16
Slc1a6O35544 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc1a6O35544 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Slc1a6O35544 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.02□□□□□ -0.17
Slc1a6O35544 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.02□□□□□ -0.17
Slc1a6O35544 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Slc1a6O35544 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Slc1a6O35544 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Slc1a6O35544 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.02□□□□□ -0.17
Slc1a6O35544 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.02□□□□□ -0.17
Slc1a6O35544 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.02□□□□□ -0.17
Slc1a6O35544 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc1a6O35544 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.01□□□□□ -0.17
Slc1a6O35544 Gm10060-201ENSMUST00000212002 111 ntBASIC14.01□□□□□ -0.17
Slc1a6O35544 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc1a6O35544 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.01□□□□□ -0.17
Slc1a6O35544 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc1a6O35544 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Nudt18-203ENSMUST00000228768 1578 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Slc1a6O35544 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Gm9109-201ENSMUST00000120254 1405 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Slc1a6O35544 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Gm13597-201ENSMUST00000121239 375 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14□□□□□ -0.17
Slc1a6O35544 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 AC123645.1-201ENSMUST00000228469 605 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Gm43570-201ENSMUST00000199951 3688 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Gm38346-201ENSMUST00000192379 2639 ntBASIC14□□□□□ -0.17
Slc1a6O35544 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Slc1a6O35544 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Slc1a6O35544 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc1a6O35544 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms