Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Cx3cl1O35188 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Cx3cl1O35188 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.39□□□□□ -0.27
Cx3cl1O35188 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.39□□□□□ -0.27
Cx3cl1O35188 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gm5566-201ENSMUST00000116118 459 ntBASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cl1O35188 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Gm8410-201ENSMUST00000117225 605 ntBASIC13.38□□□□□ -0.27
Cx3cl1O35188 Gm12134-201ENSMUST00000122109 520 ntBASIC13.38□□□□□ -0.27
Cx3cl1O35188 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Gm9719-201ENSMUST00000162765 543 ntBASIC13.38□□□□□ -0.27
Cx3cl1O35188 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.38□□□□□ -0.27
Cx3cl1O35188 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.38□□□□□ -0.27
Cx3cl1O35188 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cl1O35188 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms