Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Gm24589-201ENSMUST00000116692 94 ntBASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Thap2-203ENSMUST00000218989 527 ntBASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav12d-1A0N8R0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gm13597-201ENSMUST00000121239 375 ntBASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms