Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm18669-201ENSMUST00000216049 778 ntBASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1bQ9Z2C6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1bQ9Z2C6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1bQ9Z2C6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1bQ9Z2C6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Upk1bQ9Z2C6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1bQ9Z2C6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1bQ9Z2C6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms