Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn3Q9Z0G9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn3Q9Z0G9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn3Q9Z0G9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn3Q9Z0G9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn3Q9Z0G9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms