Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf4Q9QZS2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Ank2-226ENSMUST00000189368 339 ntBASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf4Q9QZS2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms