Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm23547-201ENSMUST00000158210 271 ntBASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Olfr286-202ENSMUST00000205305 969 ntBASIC13.26□□□□□ -0.29
Cdc40Q9DC48 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gm9182-201ENSMUST00000217829 639 ntBASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.25□□□□□ -0.29
Cdc40Q9DC48 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm12428-201ENSMUST00000119844 727 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Mir6977-201ENSMUST00000184960 64 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm38294-201ENSMUST00000192831 381 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm18049-201ENSMUST00000208909 581 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms