Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tmem88Q9D0N8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmem88Q9D0N8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Gm5587-201ENSMUST00000206270 674 ntBASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmem88Q9D0N8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmem88Q9D0N8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms