Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Gm14719-201ENSMUST00000121891 340 ntBASIC13.48□□□□□ -0.25
Otud1Q9CUB6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 AA619741-201ENSMUST00000195095 646 ntBASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.48□□□□□ -0.25
Otud1Q9CUB6 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Otud1Q9CUB6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm15653-201ENSMUST00000119247 907 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Mir6977-201ENSMUST00000184960 64 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm42660-201ENSMUST00000197733 947 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Otud1Q9CUB6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.46□□□□□ -0.25
Otud1Q9CUB6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Gm27437-201ENSMUST00000183429 107 ntBASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Gm7063-201ENSMUST00000186840 981 ntBASIC13.46□□□□□ -0.25
Otud1Q9CUB6 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Otud1Q9CUB6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Otud1Q9CUB6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms