Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4Q99P72 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.4■□□□□ 0.54
Rtn4Q99P72 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4Q99P72 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4Q99P72 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4Q99P72 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn4Q99P72 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn4Q99P72 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn4Q99P72 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Rtn4Q99P72 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.39■□□□□ 0.53
Rtn4Q99P72 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.39■□□□□ 0.53
Rtn4Q99P72 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4Q99P72 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Gm17837-201ENSMUST00000186435 985 ntBASIC18.38■□□□□ 0.53
Rtn4Q99P72 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 AC158388.1-201ENSMUST00000225441 256 ntBASIC18.38■□□□□ 0.53
Rtn4Q99P72 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4Q99P72 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm6415-201ENSMUST00000118488 348 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm27920-201ENSMUST00000183953 96 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 Mir7023-201ENSMUST00000185093 64 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms