Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdca3Q99M54 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdca3Q99M54 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdca3Q99M54 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdca3Q99M54 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdca3Q99M54 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdca3Q99M54 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.27□□□□□ -0.29
Cdca3Q99M54 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdca3Q99M54 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm6415-201ENSMUST00000118488 348 ntBASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm13223-201ENSMUST00000118609 747 ntBASIC13.26□□□□□ -0.29
Cdca3Q99M54 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.26□□□□□ -0.29
Cdca3Q99M54 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdca3Q99M54 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.25□□□□□ -0.29
Cdca3Q99M54 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.25□□□□□ -0.29
Cdca3Q99M54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdca3Q99M54 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.25□□□□□ -0.29
Cdca3Q99M54 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.25□□□□□ -0.29
Cdca3Q99M54 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms