Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm15653-201ENSMUST00000119247 907 ntBASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm14042-201ENSMUST00000120139 833 ntBASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc1bQ920F6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gm15824-201ENSMUST00000119516 955 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gm45668-201ENSMUST00000211271 493 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gm15823-201ENSMUST00000064305 670 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc1bQ920F6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.43■□□□□ 0.22
Smc1bQ920F6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Gm4875-201ENSMUST00000118257 786 ntBASIC16.42■□□□□ 0.22
Smc1bQ920F6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc1bQ920F6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms