Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.81■□□□□ 0.12
Ddx39aQ8VDW0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx39aQ8VDW0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Gm12091-201ENSMUST00000146791 830 ntBASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Gm6180-201ENSMUST00000065243 498 ntBASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx39aQ8VDW0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Gm37917-201ENSMUST00000194711 392 ntBASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx39aQ8VDW0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx39aQ8VDW0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms