Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.43□□□□□ -0.1
Slf1Q8R3P9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slf1Q8R3P9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.42□□□□□ -0.1
Slf1Q8R3P9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Slf1Q8R3P9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slf1Q8R3P9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slf1Q8R3P9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms