Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubqln1Q8R317 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Ubqln1Q8R317 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ubqln1Q8R317 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ubqln1Q8R317 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm9824-201ENSMUST00000178707 561 ntBASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubqln1Q8R317 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Gm10576-201ENSMUST00000191927 825 ntBASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Gm43474-201ENSMUST00000196415 774 ntBASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ubqln1Q8R317 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms