Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13□□□□□ -0.33
Ebf4Q8K4J2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm6659-201ENSMUST00000174752 547 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm2451-201ENSMUST00000199447 999 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm10290-201ENSMUST00000200451 999 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Olfr286-202ENSMUST00000205305 969 ntBASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ebf4Q8K4J2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms