Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfwd3Q8CIK8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Gm13015-201ENSMUST00000118674 204 ntBASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfwd3Q8CIK8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfwd3Q8CIK8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gm14042-201ENSMUST00000120139 833 ntBASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfwd3Q8CIK8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms