Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Smc2Q8CG48 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smc2Q8CG48 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Smc2Q8CG48 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Gm43514-201ENSMUST00000198852 424 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.33■□□□□ 0.2
Smc2Q8CG48 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc2Q8CG48 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Gm27525-201ENSMUST00000184465 107 ntBASIC16.32■□□□□ 0.2
Smc2Q8CG48 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smc2Q8CG48 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.31■□□□□ 0.2
Smc2Q8CG48 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.31■□□□□ 0.2
Smc2Q8CG48 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.31■□□□□ 0.2
Smc2Q8CG48 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc2Q8CG48 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc2Q8CG48 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms