Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Gm15460-201ENSMUST00000118147 391 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Mir3102-201ENSMUST00000175555 104 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm18027-201ENSMUST00000218947 619 ntBASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a6Q8C6K9 Gm8749-201ENSMUST00000117737 331 ntBASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a6Q8C6K9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms