Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco3Q8BQM7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Gm10231-201ENSMUST00000181584 441 ntBASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Gm10175-202ENSMUST00000208752 441 ntBASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms