Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm5186-201ENSMUST00000218781 920 ntBASIC11.68□□□□□ -0.54
Sox21Q811W0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox21Q811W0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox21Q811W0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox21Q811W0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox21Q811W0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox21Q811W0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox21Q811W0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm9719-201ENSMUST00000162765 543 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm25144-201ENSMUST00000179561 110 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm25352-201ENSMUST00000179815 110 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm44855-201ENSMUST00000205725 362 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm45098-201ENSMUST00000207179 657 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.67□□□□□ -0.54
Sox21Q811W0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox21Q811W0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Sox21Q811W0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox21Q811W0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox21Q811W0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm24543-201ENSMUST00000103867 82 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm5566-201ENSMUST00000116118 459 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm11424-201ENSMUST00000121929 829 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.66□□□□□ -0.54
Sox21Q811W0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.66□□□□□ -0.54
Sox21Q811W0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox21Q811W0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Sox21Q811W0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox21Q811W0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms