Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm9824-201ENSMUST00000178707 561 ntBASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3d21Q7TSG5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gm26308-201ENSMUST00000157768 69 ntBASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gm24158-201ENSMUST00000175263 71 ntBASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gm18049-201ENSMUST00000208909 581 ntBASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3d21Q7TSG5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm23935-201ENSMUST00000102303 57 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm24270-201ENSMUST00000102326 57 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm25287-201ENSMUST00000103846 110 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm22918-201ENSMUST00000103855 110 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm24245-201ENSMUST00000157318 57 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3d21Q7TSG5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3d21Q7TSG5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms