Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp3Q7TNH6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp3Q7TNH6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp3Q7TNH6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nphp3Q7TNH6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nphp3Q7TNH6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm22189-201ENSMUST00000103822 86 ntBASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm33320-201ENSMUST00000192232 530 ntBASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm44608-201ENSMUST00000206827 855 ntBASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm7730-201ENSMUST00000212486 454 ntBASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp3Q7TNH6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms