Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Gm4804-201ENSMUST00000182234 999 ntBASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubfd1Q78JW9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm12859-201ENSMUST00000117834 427 ntBASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm5425-201ENSMUST00000214125 459 ntBASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubfd1Q78JW9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms