Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Gm11331-201ENSMUST00000119764 288 ntBASIC11.99□□□□□ -0.49
Rif1Q6PR54 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Gm18905-201ENSMUST00000205454 928 ntBASIC11.99□□□□□ -0.49
Rif1Q6PR54 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rif1Q6PR54 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gm37489-201ENSMUST00000191883 159 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gm17889-201ENSMUST00000198410 598 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Mir6927-201ENSMUST00000184494 71 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gm38144-201ENSMUST00000192790 465 ntBASIC11.98□□□□□ -0.49
Rif1Q6PR54 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rif1Q6PR54 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm6023-201ENSMUST00000118217 606 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm11597-201ENSMUST00000121423 964 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm19078-201ENSMUST00000206311 727 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm27023-201ENSMUST00000182372 285 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.97□□□□□ -0.49
Rif1Q6PR54 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rif1Q6PR54 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms