Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf220Q6PDX6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gm7506-201ENSMUST00000207758 815 ntBASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gm8655-201ENSMUST00000221159 852 ntBASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf220Q6PDX6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf220Q6PDX6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Gm12895-201ENSMUST00000122214 226 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms