Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mre11Q61216 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.09■□□□□ 0.33
Mre11Q61216 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Mre11Q61216 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Mre11Q61216 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.09■□□□□ 0.33
Mre11Q61216 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.09■□□□□ 0.33
Mre11Q61216 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Mre11Q61216 Gm21156-201ENSMUST00000189693 869 ntBASIC17.09■□□□□ 0.33
Mre11Q61216 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.09■□□□□ 0.33
Mre11Q61216 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.09■□□□□ 0.33
Mre11Q61216 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mre11Q61216 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mre11Q61216 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mre11Q61216 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mre11Q61216 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.08■□□□□ 0.33
Mre11Q61216 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mre11Q61216 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mre11Q61216 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.08■□□□□ 0.33
Mre11Q61216 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Mre11Q61216 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mre11Q61216 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.08■□□□□ 0.32
Mre11Q61216 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Mre11Q61216 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.08■□□□□ 0.32
Mre11Q61216 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mre11Q61216 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.07■□□□□ 0.32
Mre11Q61216 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.07■□□□□ 0.32
Mre11Q61216 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.07■□□□□ 0.32
Mre11Q61216 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Mre11Q61216 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm25016-201ENSMUST00000158399 131 ntBASIC17.07■□□□□ 0.32
Mre11Q61216 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Mre11Q61216 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Mre11Q61216 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Mre11Q61216 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm27646-201ENSMUST00000183989 110 ntBASIC17.07■□□□□ 0.32
Mre11Q61216 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.07■□□□□ 0.32
Mre11Q61216 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.07■□□□□ 0.32
Mre11Q61216 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Mre11Q61216 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mre11Q61216 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mre11Q61216 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mre11Q61216 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mre11Q61216 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mre11Q61216 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.06■□□□□ 0.32
Mre11Q61216 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms