Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Gm10175-201ENSMUST00000086013 645 ntBASIC14.1□□□□□ -0.15
Scn2bQ56A07 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.1□□□□□ -0.15
Scn2bQ56A07 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn2bQ56A07 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm15483-201ENSMUST00000120338 456 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm14822-201ENSMUST00000122247 291 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm5479-201ENSMUST00000160578 435 ntBASIC14.09□□□□□ -0.15
Scn2bQ56A07 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn2bQ56A07 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn2bQ56A07 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.08□□□□□ -0.16
Scn2bQ56A07 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms