Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col6a2Q02788 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col6a2Q02788 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a2Q02788 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a2Q02788 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Col6a2Q02788 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Syt7-205ENSMUST00000224135 1557 ntBASIC14.22□□□□□ -0.13
Col6a2Q02788 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a2Q02788 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Gm29667-201ENSMUST00000190817 490 ntBASIC14.21□□□□□ -0.13
Col6a2Q02788 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.21□□□□□ -0.13
Col6a2Q02788 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a2Q02788 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.21□□□□□ -0.13
Col6a2Q02788 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.21□□□□□ -0.14
Col6a2Q02788 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a2Q02788 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Gm12882-201ENSMUST00000121696 517 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Gm33320-201ENSMUST00000192232 530 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.2□□□□□ -0.14
Col6a2Q02788 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a2Q02788 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a2Q02788 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms