Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
SgcaP82350 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SgcaP82350 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcaP82350 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SgcaP82350 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SgcaP82350 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SgcaP82350 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.95□□□□□ -0.5
SgcaP82350 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.95□□□□□ -0.5
SgcaP82350 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.95□□□□□ -0.5
SgcaP82350 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.95□□□□□ -0.5
SgcaP82350 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SgcaP82350 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SgcaP82350 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.95□□□□□ -0.5
SgcaP82350 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.95□□□□□ -0.5
SgcaP82350 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SgcaP82350 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcaP82350 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SgcaP82350 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.94□□□□□ -0.5
SgcaP82350 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.94□□□□□ -0.5
SgcaP82350 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gm27646-201ENSMUST00000183989 110 ntBASIC11.94□□□□□ -0.5
SgcaP82350 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.94□□□□□ -0.5
SgcaP82350 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.94□□□□□ -0.5
SgcaP82350 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SgcaP82350 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SgcaP82350 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcaP82350 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SgcaP82350 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SgcaP82350 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SgcaP82350 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms