Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atf1P81269 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atf1P81269 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atf1P81269 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Atf1P81269 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atf1P81269 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Atf1P81269 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.34□□□□□ -0.43
Atf1P81269 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.33□□□□□ -0.44
Atf1P81269 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Atf1P81269 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.33□□□□□ -0.44
Atf1P81269 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.33□□□□□ -0.44
Atf1P81269 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Gm18737-201ENSMUST00000173594 937 ntBASIC12.33□□□□□ -0.44
Atf1P81269 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.33□□□□□ -0.44
Atf1P81269 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Atf1P81269 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Atf1P81269 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Atf1P81269 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atf1P81269 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.32□□□□□ -0.44
Atf1P81269 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.32□□□□□ -0.44
Atf1P81269 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Atf1P81269 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Atf1P81269 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Atf1P81269 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.32□□□□□ -0.44
Atf1P81269 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Atf1P81269 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atf1P81269 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atf1P81269 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atf1P81269 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf1P81269 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf1P81269 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf1P81269 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf1P81269 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atf1P81269 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms