Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cks1bP61025 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.19□□□□□ -0.78
Cks1bP61025 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.19□□□□□ -0.78
Cks1bP61025 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.19□□□□□ -0.78
Cks1bP61025 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cks1bP61025 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Cks1bP61025 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.19□□□□□ -0.78
Cks1bP61025 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Cks1bP61025 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.19□□□□□ -0.78
Cks1bP61025 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cks1bP61025 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1bP61025 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1bP61025 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cks1bP61025 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.18□□□□□ -0.78
Cks1bP61025 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Gm44454-201ENSMUST00000198541 138 ntBASIC10.18□□□□□ -0.78
Cks1bP61025 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.18□□□□□ -0.78
Cks1bP61025 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.18□□□□□ -0.78
Cks1bP61025 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cks1bP61025 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1bP61025 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms