Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Nup43P59235 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup43P59235 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup43P59235 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nup43P59235 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nup43P59235 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nup43P59235 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Nup43P59235 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nup43P59235 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.46□□□□□ -0.25
Nup43P59235 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nup43P59235 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.46□□□□□ -0.25
Nup43P59235 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nup43P59235 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup43P59235 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Nup43P59235 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup43P59235 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 BC001981-202ENSMUST00000191393 1545 ntBASIC13.45□□□□□ -0.26
Nup43P59235 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nup43P59235 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nup43P59235 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Mir6956-201ENSMUST00000183598 62 ntBASIC13.45□□□□□ -0.26
Nup43P59235 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.45□□□□□ -0.26
Nup43P59235 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.45□□□□□ -0.26
Nup43P59235 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.45□□□□□ -0.26
Nup43P59235 Dupd1-202ENSMUST00000224735 548 ntBASIC13.45□□□□□ -0.26
Nup43P59235 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nup43P59235 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Mir125a-201ENSMUST00000083545 68 ntBASIC13.45□□□□□ -0.26
Nup43P59235 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.45□□□□□ -0.26
Nup43P59235 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nup43P59235 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup43P59235 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.44□□□□□ -0.26
Nup43P59235 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.44□□□□□ -0.26
Nup43P59235 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Gm25144-201ENSMUST00000179561 110 ntBASIC13.44□□□□□ -0.26
Nup43P59235 Gm25352-201ENSMUST00000179815 110 ntBASIC13.44□□□□□ -0.26
Nup43P59235 Gm27618-201ENSMUST00000183671 60 ntBASIC13.44□□□□□ -0.26
Nup43P59235 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup43P59235 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms