Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Tpm1P58771 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Tpm1P58771 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Tpm1P58771 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.91■□□□□ 0.14
Tpm1P58771 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Tpm1P58771 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Tpm1P58771 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Tpm1P58771 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Tpm1P58771 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.9■□□□□ 0.14
Tpm1P58771 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Tpm1P58771 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.9■□□□□ 0.14
Tpm1P58771 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Tpm1P58771 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.9■□□□□ 0.14
Tpm1P58771 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tpm1P58771 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Tpm1P58771 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Tpm1P58771 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.89■□□□□ 0.13
Tpm1P58771 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.89■□□□□ 0.13
Tpm1P58771 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.89■□□□□ 0.13
Tpm1P58771 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.89■□□□□ 0.13
Tpm1P58771 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.89■□□□□ 0.13
Tpm1P58771 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tpm1P58771 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.89■□□□□ 0.13
Tpm1P58771 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Tpm1P58771 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.88■□□□□ 0.13
Tpm1P58771 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.88■□□□□ 0.13
Tpm1P58771 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpm1P58771 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpm1P58771 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms