Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
SmoP56726 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SmoP56726 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SmoP56726 Gm15393-201ENSMUST00000120499 219 ntBASIC14.31□□□□□ -0.12
SmoP56726 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.31□□□□□ -0.12
SmoP56726 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.31□□□□□ -0.12
SmoP56726 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.31□□□□□ -0.12
SmoP56726 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SmoP56726 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.31□□□□□ -0.12
SmoP56726 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SmoP56726 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.31□□□□□ -0.12
SmoP56726 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SmoP56726 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SmoP56726 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
SmoP56726 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SmoP56726 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Gm9522-201ENSMUST00000182394 926 ntBASIC14.3□□□□□ -0.12
SmoP56726 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.3□□□□□ -0.12
SmoP56726 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.3□□□□□ -0.12
SmoP56726 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SmoP56726 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.3□□□□□ -0.12
SmoP56726 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SmoP56726 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.29□□□□□ -0.12
SmoP56726 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SmoP56726 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.29□□□□□ -0.12
SmoP56726 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.29□□□□□ -0.12
SmoP56726 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
SmoP56726 Gm20445-201ENSMUST00000061905 565 ntBASIC14.29□□□□□ -0.12
SmoP56726 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.29□□□□□ -0.12
SmoP56726 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SmoP56726 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SmoP56726 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.28□□□□□ -0.12
SmoP56726 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SmoP56726 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SmoP56726 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms