Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.48□□□□□ -0.25
Nkx2-6P43688 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-6P43688 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm42612-201ENSMUST00000197986 623 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm43170-201ENSMUST00000199827 612 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm45668-201ENSMUST00000211271 493 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm7653-201ENSMUST00000214567 508 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm15823-201ENSMUST00000064305 670 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.47□□□□□ -0.25
Nkx2-6P43688 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-6P43688 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Gm18018-201ENSMUST00000198273 408 ntBASIC13.46□□□□□ -0.25
Nkx2-6P43688 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.46□□□□□ -0.25
Nkx2-6P43688 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-6P43688 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-6P43688 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-6P43688 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms